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Creators/Authors contains: "Rhea, Sarah"

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  1. Abstract Objective: Current guidance states that asymptomatic screening for severe acute respiratory coronavirus virus 2 (SARS-CoV-2) prior to admission to an acute-care setting is at the facility’s discretion. This study’s objective was to estimate the number of undetected cases of SARS-CoV-2 admitted as inpatients under 4 testing approaches and varying assumptions. Design and setting: Individual-based microsimulation of 104 North Carolina acute-care hospitals Patients: All simulated inpatient admissions to acute-care hospitals from December 15, 2021, to January 13, 2022 [ie, during the SARS-COV-2 ο (omicron) variant surge]. Interventions: We simulated (1) only testing symptomatic patients, (2) 1-stage antigen testing with no confirmatory polymerase chain reaction (PCR) test, (3) 1-stage antigen testing with a confirmatory PCR for negative results, and (4) serial antigen screening (ie, repeat antigen test 2 days after a negative result). Results: Over 1 month, there were 77,980 admissions: 13.7% for COVID-19, 4.3% with but not for COVID-19, and 82.0% for non–COVID-19 indications without current infection. Without asymptomatic screening, 1,089 (credible interval [CI], 946–1,253) total SARS-CoV-2 infections (7.72%) went undetected. With 1-stage antigen screening, 734 (CI, 638–845) asymptomatic infections (67.4%) were detected, with 1,277 false positives. With combined antigen and PCR screening, 1,007 (CI, 875–1,159) asymptomatic infections (92.5%) were detected, with 5,578 false positives. A serial antigen testing policy detected 973 (CI, 845–1,120) asymptomatic infections (89.4%), with 2,529 false positives. Conclusions: Serial antigen testing identified >85% of asymptomatic infections and resulted in fewer false positives with less cost per identified infection compared to combined antigen plus PCR testing. 
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  2. null (Ed.)
    Prompt surveillance and forecasting of COVID-19 spread are of critical importance for slowing down the pandemic and for the success of any public mitigation efforts. However, as with any infectious disease with rapid transmission and high virulence, lack of COVID-19 observations for near-real-time forecasting is still the key challenge obstructing operational disease prediction and control. In this context, we can follow the two approaches to forecasting COVID-19 dynamics: based on mechanistic models and based on machine learning. Mechanistic models are better in capturing an epidemiological curve, using a low amount of data, and describing the overall trajectory of the disease dynamics, hence, providing long-term insights into where the disease might go. Machine learning, in turn, can provide more precise data-driven forecasts especially in the short-term horizons, while suffering from limited interpretability and usually requiring backlog history on the infectious disease. We propose a unified reinforcement learning framework that combines the two approaches. That is, long-term trajectory forecasts are used in machine learning techniques to forecast local variability which is not captured by the mechanistic model. 
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